gmx-users@gromacs.org
Sent: Thursday, December 15, 2011 10:28 PM
Subject: Re: [gmx-users] calculation of density for martini coarse-grained
Thank you very much.
Best Regards
Sara
From: Justin A. Lemkul jalem...@vt.edu
To: Discussion list for GROMACS
AM
Subject: Re: [gmx-users] calculation of density for martini coarse-grained
On 15/12/2011 5:59 PM, mohammad agha wrote:
Dear Prof.
May I ask you two questions, Please?
1- I work with MARTINI force field. I have a surfactant molecule
consists of 5 beads. After I placed 151 surfactants
, 2011 11:19 AM
*Subject:* Re: [gmx-users] calculation of density for martini
coarse-grained
On 15/12/2011 5:59 PM, mohammad agha wrote:
Dear Prof.
May I ask you two questions, Please?
1- I work with MARTINI force field. I have a surfactant molecule
consists of 5 beads. After I placed 151
, December 15, 2011 6:31 PM
Subject: Re: [gmx-users] calculation of density for martini coarse-grained
On 16/12/2011 1:36 AM, mohammad agha wrote:
Dear Prof.
Thank you for your reply.
I'm really sorry for my mistake in writing the density!! my calculated density
become: 90.254026 gr/l while
@gromacs.org
mailto:gmx-users@gromacs.org
*Sent:* Thursday, December 15, 2011 11:19 AM
*Subject:* Re: [gmx-users] calculation of density for martini
coarse-grained
On 15/12/2011 5:59 PM, mohammad agha wrote:
Dear Prof.
May I ask you two questions, Please?
1- I work with MARTINI force field. I have
jalem...@vt.edu
*To:* mohammad agha mra...@yahoo.com; Discussion list for GROMACS
users gmx-users@gromacs.org
*Sent:* Thursday, December 15, 2011 9:26 PM
*Subject:* Re: [gmx-users] calculation of density for martini coarse-grained
mohammad agha wrote:
Dear Prof.
Thank you very much
Thank you very much.
Best Regards
Sara
From: Justin A. Lemkul jalem...@vt.edu
To: Discussion list for GROMACS users gmx-users@gromacs.org
Sent: Thursday, December 15, 2011 10:02 PM
Subject: Re: [gmx-users] calculation of density for martini coarse-grained
From: mohammad agha mra...@yahoo.com
To: jalem...@vt.edu jalem...@vt.edu; Discussion list for GROMACS users
gmx-users@gromacs.org
Sent: Thursday, December 15, 2011 10:28 PM
Subject: Re: [gmx-users] calculation of density for martini coarse-grained
Thank you very
Dear Prof.
May I ask you two questions, Please?
1- I work with MARTINI force field. I have a surfactant molecule consists of 5
beads. After I placed 151 surfactants into my simulation box (cubic) with
length of 10 nm, Gromacs reported:
Volume = 1000 nm3
Density = 15.8111 gr/l
My volume is
On 15/12/2011 5:59 PM, mohammad agha wrote:
Dear Prof.
May I ask you two questions, Please?
1- I work with MARTINI force field. I have a surfactant molecule
consists of 5 beads. After I placed 151 surfactants into my simulation
box (cubic) with length of 10 nm, Gromacs reported:
Volume =
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