Re: [gmx-users] enough time for simulation

2013-01-08 Thread rama david
Dear Mohammad, I am not a specialist in gromacs. To observe these phenomenon the time scale is much up to 1microsecond . So which forcefield you decided to use ??? People generally use Martini Coarse Grain FF for these type of work. You have to run the system up to you reach your desire

[gmx-users] enough time for simulation

2013-01-07 Thread mohammad agha
Dear GROMACS Specialists, I have one system consists of many surfactant molecules that they create several micelles. How should I know that time of simulation is enough or not? that means where is the enough time for equilibrium of system? To creation of micelles, the small oligomers are merged