[gmx-users] error ffg53a and thanks

2008-08-27 Thread shahrbanoo karbalaee
Dear justin mer30.and thanks .you are great.I do it as you tell me.and work. best wishes sh-karbalaee ___ gmx-users mailing listgmx-users@gromacs.org http://www.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.or

Re: [gmx-users] error ffg53a

2008-08-27 Thread Justin A. Lemkul
shahrbanoo karbalaee wrote: Dear justin as you wrote, the first I make tfe.topology with this force field by command pdb2gmx and pdbfile from prodrg.and add to box with spc.now I have the file spc and tfe.by command grommp I minimized this file .I got a file emsolve.after this ,I work on th

[gmx-users] error ffg53a

2008-08-27 Thread shahrbanoo karbalaee
Dear justin as you wrote, the first I make tfe.topology with this force field by command pdb2gmx and pdbfile from prodrg.and add to box with spc.now I have the file spc and tfe.by command grommp I minimized this file .I got a file emsolve.after this ,I work on this peptide . pdb2gmx -f name -