[gmx-users] g_enemat problem & suggestion

2013-04-11 Thread Jernej Zidar
g_energy states all the groups missing by g_enemat are present in the energy file: 45 Coul-SR:unit1-unit1 46 LJ-SR:unit1-unit1 47 Coul-14:unit1-unit1 48 LJ-14:unit1-unit1 49 Coul-SR:unit1-unit2 50 LJ-SR:unit1-unit2 51 Coul-14:unit1-unit2

[gmx-users] g_enemat problem & suggestion

2013-04-11 Thread Jernej Zidar
Hi, I would to calculate the interaction energies between two polymer molecules (unit1 and unit2) and the Water_CL_NA So the combinations are: unit1-unit2, unit1-Water_CL_NA, unit2-Water_CL_NA. After reading the documentation it seemed the tool g_enemat might be able to do just that in one go.