On 8/03/2011 9:44 PM, Ehud Schreiber wrote:
Dear Gromacs users,
I am working with version 4.5.3, using the opls-aa forcefield in an
implicit solvent, all-vs-all setting:
pdb2gmx -ter -ff oplsaa -water none -f file.pdb
I am energy-minimizing structures in 3 stages (steep, cg and l-bfgs).
Th
Dear Gromacs users,
I am working with version 4.5.3, using the opls-aa forcefield in an
implicit solvent, all-vs-all setting:
pdb2gmx -ter -ff oplsaa -water none -f file.pdb
I am energy-minimizing structures in 3 stages (steep, cg and l-bfgs).
The last stage is the following:
grompp
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