Re: [gmx-users] g_hbond and Autocorrelation function

2010-02-22 Thread David van der Spoel
On 2/22/10 9:47 AM, leilakar...@aol.com wrote: Hi I used g_hbond for analyzing hydrogen bonds. What is difference between [s0 legend "Ac\sfin sys\v{}\z{}(t)"] and [s1 legend "Ac(t)"] in hbac.xvg file in below? First one is "corrected" for the fact that in a finite system the ACF does not go t

[gmx-users] g_hbond and Autocorrelation function

2010-02-22 Thread leilakarami
Hi I used g_hbond for analyzing hydrogen bonds. What is difference between [s0 legend "Ac\sfin sys\v{}\z{}(t)"] and [s1 legend "Ac(t)"] in hbac.xvg file in below? @title "Hydrogen Bond Autocorrelation" @xaxis label "Time (ps)" @yaxis label "C(t)" @ s0 legend "Ac\sfin sys\v{