Re: [gmx-users] g_sdf again

2007-03-30 Thread Qiao Baofu
2007/3/29, Dallas B. Warren [EMAIL PROTECTED]: Syma, I am using g_sdf to calculating the spatial distribution of lipid headgroups around other species in my system. The thing is when I get the gro file (produced by using the -r flag in g_sdf) and then look at this in vmd or chimera with

RE: [gmx-users] g_sdf again

2007-03-30 Thread syma
:[EMAIL PROTECTED] On Behalf Of Qiao Baofu Sent: 30 March 2007 08:19 To: Discussion list for GROMACS users Subject: Re: [gmx-users] g_sdf again 2007/3/29, Dallas B. Warren [EMAIL PROTECTED]: Syma, I am using g_sdf to calculating the spatial distribution of lipid headgroups around other

[gmx-users] g_sdf again

2007-03-29 Thread syma
Hi, I am using g_sdf to calculating the spatial distribution of lipid headgroups around other species in my system. The thing is when I get the gro file (produced by using the -r flag in g_sdf) and then look at this in vmd or chimera with my spatial density file (plt), the reference gro file is

RE: [gmx-users] g_sdf again

2007-03-29 Thread Dallas B. Warren
Syma, I am using g_sdf to calculating the spatial distribution of lipid headgroups around other species in my system. The thing is when I get the gro file (produced by using the -r flag in g_sdf) and then look at this in vmd or chimera with my spatial density file (plt), the reference