Hi there, I am trying:
~/Downloads/gromacs-4.5.1/build% cmake -DGMX_OPENMM=ON .. ~/Downloads/gromacs-4.5.1/build% make mdrun [ 1%] Building NVCC (Device) object src/kernel/gmx_gpu_utils/./gmx_gpu_utils_generated_memtestG80_core.cu.o [ 1%] Building NVCC (Device) object src/kernel/gmx_gpu_utils/./gmx_gpu_utils_generated_gmx_gpu_utils.cu.o Scanning dependencies of target gmx_gpu_utils Linking CXX shared library libgmx_gpu_utils.dylib Undefined symbols: "_gmx_strncasecmp", referenced from: is_supported_cuda_gpu(int, char*)in gmx_gpu_utils_generated_gmx_gpu_utils.cu.o is_supported_cuda_gpu(int, char*)in gmx_gpu_utils_generated_gmx_gpu_utils.cu.o is_supported_cuda_gpu(int, char*)in gmx_gpu_utils_generated_gmx_gpu_utils.cu.o is_supported_cuda_gpu(int, char*)in gmx_gpu_utils_generated_gmx_gpu_utils.cu.o is_supported_cuda_gpu(int, char*)in gmx_gpu_utils_generated_gmx_gpu_utils.cu.o is_supported_cuda_gpu(int, char*)in gmx_gpu_utils_generated_gmx_gpu_utils.cu.o is_supported_cuda_gpu(int, char*)in gmx_gpu_utils_generated_gmx_gpu_utils.cu.o is_supported_cuda_gpu(int, char*)in gmx_gpu_utils_generated_gmx_gpu_utils.cu.o "_debug", referenced from: is_supported_cuda_gpu(int, char*)in gmx_gpu_utils_generated_gmx_gpu_utils.cu.o do_timed_memtest(int, int)in gmx_gpu_utils_generated_gmx_gpu_utils.cu.o do_full_memtest(int) in gmx_gpu_utils_generated_gmx_gpu_utils.cu.o do_quick_memtest(int) in gmx_gpu_utils_generated_gmx_gpu_utils.cu.o "_trim", referenced from: is_supported_cuda_gpu(int, char*)in gmx_gpu_utils_generated_gmx_gpu_utils.cu.o is_supported_cuda_gpu(int, char*)in gmx_gpu_utils_generated_gmx_gpu_utils.cu.o is_supported_cuda_gpu(int, char*)in gmx_gpu_utils_generated_gmx_gpu_utils.cu.o is_supported_cuda_gpu(int, char*)in gmx_gpu_utils_generated_gmx_gpu_utils.cu.o is_supported_cuda_gpu(int, char*)in gmx_gpu_utils_generated_gmx_gpu_utils.cu.o is_supported_cuda_gpu(int, char*)in gmx_gpu_utils_generated_gmx_gpu_utils.cu.o is_supported_cuda_gpu(int, char*)in gmx_gpu_utils_generated_gmx_gpu_utils.cu.o is_supported_cuda_gpu(int, char*)in gmx_gpu_utils_generated_gmx_gpu_utils.cu.o ld: symbol(s) not found collect2: ld returned 1 exit status make[3]: *** [src/kernel/gmx_gpu_utils/libgmx_gpu_utils.dylib] Error 1 make[2]: *** [src/kernel/gmx_gpu_utils/CMakeFiles/gmx_gpu_utils.dir/all] Error 2 make[1]: *** [src/kernel/CMakeFiles/mdrun.dir/rule] Error 2 make: *** [mdrun] Error 2 Same thing with gmx from git. Any idea? Thanks. Alan -- Alan Wilter S. da Silva, D.Sc. - CCPN Research Associate Department of Biochemistry, University of Cambridge. 80 Tennis Court Road, Cambridge CB2 1GA, UK. >>http://www.bio.cam.ac.uk/~awd28<<
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