It is not sure what you mean: if you wonder how it is done in Martini
(explained in the paper) or if like to add some yourself.
Regular bonds are generally used!
On Mar 4, 2010, at 6:15, Ajeeta kaushiki
wrote:
Dear Sir
I am doing a coarse grain MD of a membrane protein using Martini
On 4/03/2010 10:15 PM, Ajeeta kaushiki wrote:
Dear Sir
I am doing a coarse grain MD of a membrane protein using Martini force
field and parameters . In course I am facing problem in understanding "
how the harmonic restraints will be applied to mimic secondary structure
H- Bonds of the atomic s
Dear Sir
I am doing a coarse grain MD of a membrane protein using Martini force field
and parameters . In course I am facing problem in understanding " how the
harmonic restraints will be applied to mimic secondary structure H- Bonds of
the atomic structure to the coarse grain model to maintain s
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