[gmx-users] how to prepare implicit solvent system??

2011-04-19 Thread 김현식
Dear experts, hi, I'm using Gromacs for implicit solvent system, Can anybody let me know hot to prepare the implicit solvent system?? Thanks -- gmx-users mailing listgmx-users@gromacs.org http://lists.gromacs.org/mailman/listinfo/gmx-users Please

Re: [gmx-users] how to prepare implicit solvent system??

2011-04-19 Thread Justin A. Lemkul
김현식 wrote: Dear experts, hi, I'm using Gromacs for implicit solvent system, Can anybody let me know hot to prepare the implicit solvent system?? Just as you would any other system, except you don't need to define a unit cell full of water and ions. pdb2gmx, grompp, mdrun. There are

Re: [gmx-users] how to prepare implicit solvent system??

2011-04-19 Thread Justin A. Lemkul
. That's sort of the point. -Justin Date: Tue, 19 Apr 2011 09:49:25 -0400 From: jalem...@vt.edu To: gmx-users@gromacs.org Subject: Re: [gmx-users] how to prepare implicit solvent system?? 김현식 wrote: Dear experts, hi, I'm using Gromacs for implicit solvent system, Can