[gmx-users] inconsistent energy drops

Hello, I am performing a MD simulation on a small molecule in a bilayer. The simulation seems to run smoothly but when i graph the energy i see large changes in energy randomly throughout the run(see graph). http://gromacs.5086.x6.nabble.com/file/n5010260/potential_12cc50.png I have looked at

Re: [gmx-users] inconsistent energy drops

On 7/31/13 3:38 PM, Brad Van Oosten wrote: Hello, I am performing a MD simulation on a small molecule in a bilayer. The simulation seems to run smoothly but when i graph the energy i see large changes in energy randomly throughout the run(see graph).