vt.edu; gmx-users@gromacs.org
> Date: Fri, 20 Feb 2009 00:38:35 +
> Subject: RE: [gmx-users] input the gro and trr file into the VMD
> CC:
>
> Hi,
>
> I am sorry for that cause every time I sent my question, it shows that this
> email was not delivered and hence, I j
[jalem...@vt.edu]
Sent: Thursday, February 19, 2009 2:59 PM
To: Discussion list for GROMACS users
Subject: Re: [gmx-users] input the gro and trr file into the VMD
You've posted the same exact question five times today, even though you got a
very good response already:
http://www.gromacs.org/pipe
You've posted the same exact question five times today, even though you got a
very good response already:
http://www.gromacs.org/pipermail/gmx-users/2009-February/039830.html
If you want free advice, take what you're given, demonstrate that you've made
some efforts to solve your problem, and
Hi all users,
When I try to input the .gro and .trr file into the VMD, I always find that
there is no bond connected among the atoms.But in fact, I have defined all the
bond connection in the gromacs files. Can anyone tell me how to get the snap
shots in the VMD with the bonds among the atoms?
VMD defines the bonds according to a distance criteria.
Note that these are not defined in a gro or trr file but in the tpr,
which
is not red by VMD.
If your distances are not seen this means that the atoms are not within
the VMD's criteria. Are you using a CG model where the distances
are la
Hi all users,
When I try to input the .gro and .trr file into the VMD, I always find that
there is no bond connected among the atoms.But in fact, I have defined all the
bond connection in the gromacs files. Can anyone tell me how to get the snap
shots in the VMD with the bonds among the atoms?
Hi all users,
When I try to input the .gro and .trr file into the VMD, I always find that
there is no bond connected among the atoms.But in fact, I have defined all the
bond connection in the gromacs files. Can anyone tell me how to get the snap
shots in the VMD with the bonds among the atoms?
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