subject:"\[gmx\-users\] inquiry about SAS"

Re: [gmx-users] inquiry about SAS

2012-07-03 Thread Justin A. Lemkul

On 7/3/12 10:49 AM, Turgay Cakmak wrote: Hi all, I am calculating SAS using g_sas of my system (several peptides in water and ions, Na and Cl). I choose: for calculation group: non-water for output group: protein (400 out of 750 atoms were classified as hydrophobic) When

[gmx-users] inquiry about SAS

2012-07-03 Thread Turgay Cakmak

Hi all, I am calculating SAS using g_sas of my system (several peptides in water and ions, Na and Cl). I choose: for calculation group: non-water for output group: protein (400 out of 750 atoms were classified as hydrophobic) When I plot the Area vs time graphs, both the hydrop