On 9/13/12 11:42 AM, vidhya sankar wrote:
Dear Justin Thank you for your Previous reply,
sorry for the inconvenience to you personal Mail.
I am doing MD Cyclic Peptide When I run pdb2gmx , The Conect Infromation i
Dear Justin Thank you for your Previous reply,
sorry for the inconvenience to you personal Mail.
I am doing MD Cyclic Peptide When I run pdb2gmx , The Conect Infromation in
pdb file are ignored . so that it is not abl
On 10/05/2011 2:31 PM, vidhya sankar wrote:
Dear justin , Thanks for your valuable previous reply
Also When i run the pdb2gmx tool i got the following error
WARNING: atom O1 is missing in residue PO4 147 in the pdb file
WARNING: atom O2 is missing in residue PO4 147 in the pdb file
WARNING: at
Dear justin , Thanks for your valuable previous reply
Also When i run the pdb2gmx tool i got the following error
WARNING: atom O1 is missing in residue PO4 147 in the pdb file
WARNING: atom O2 is missing in residue PO4 147 in the pdb file
WARNING: atom O3 is missing in residue PO4 147 in the pd
Might be an idea to try a search
(http://www.gromacs.org/external/search.html) of the emailing list when
you get errors like this. This is a very common one and a significant
number of responses are available on the list, archived for future
reference.
Quick word on what the issue is, pdb2gmx is
Sivashangari Gnanasambandam wrote:
Dear all,
I am novoice to gromacs. I had created a pdb file using Material studio
Modelling. Whe I use this file to convert to top ology file it shows an
error that the
Error message - Residue 'rea' not found in residue topology database.
I had attached th
Title: Reg pdb2gmx
Dear all,
I am novoice to gromacs. I had created a pdb file using Material studio Modelling. Whe I use this file to convert to top ology file it shows an error that the
Error message - Residue 'rea' not found in residue topology database.
I had attached the pbf file cre
Title: Reg pdb2gmx
Dear all,
I am novoice to gromacs. I had created a pdb file using Material studio Modelling. Whe I use this file to convert to top ology file it shows an error that the
Error message - Residue 'rea' not found in residue topology database.
I had attached the pbf file
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