[gmx-users] removal of water from hydrophobic core of lipid

2009-05-19 Thread nitu sharma
Dear all I want remove water molecules from hydrophobic core of lipid by using script Keepbyz.pl by (chris neale) . I want to know basis of deciding uprez and lowrez variables . I mean to say how can I decide which value of uprez and lowrez is suitable for my system protein

Re: [gmx-users] removal of water from hydrophobic core of lipid

2009-05-19 Thread Justin A. Lemkul
nitu sharma wrote: Dear all I want remove water molecules from hydrophobic core of lipid by using script Keepbyz.pl by (chris neale) . I want to know basis of deciding uprez and lowrez variables . I mean to say how can I decide which value of uprez and lowrez is