Re: [gmx-users] residence time of water molecule and life time of hydrogen

2010-10-18 Thread Mark Abraham
On 18/10/2010 10:15 PM, atila petrosian wrote: *Dear Justin* ** *I read manual and specially g_hbond. but manual doesn't gime me information about * residence time of water molecule and life time of hydrogen. In your reading, did you see that g_hbond has a -life option? Did you try this?

Re: [gmx-users] residence time of water molecule and life time of hydrogen

2010-10-18 Thread Justin A. Lemkul
atila petrosian wrote: *Dear Justin* ** *I read manual and specially g_hbond. but manual doesn't gime me information about * residence time of water molecule and life time of hydrogen. The more important piece of advice I gave you was to search the mailing list archive. This same qu

[gmx-users] residence time of water molecule and life time of hydrogen

2010-10-18 Thread atila petrosian
*Dear Justin* ** *I read manual and specially g_hbond. but manual doesn't gime me information about * residence time of water molecule and life time of hydrogen. -- gmx-users mailing listgmx-users@gromacs.org http://lists.gromacs.org/mailman/listinfo/gmx-users Please search the archive at htt

Re: [gmx-users] residence time of water molecule and life time of hydrogen

2010-10-18 Thread Justin A. Lemkul
atila petrosian wrote: Hi gromacs users I am beginner in gromacs. I did md simulation of a protein by gromacs and now I want to obtain residence time of water molecule and life time of hydrogen bonds. Can I obtain both of them using gromacs? please guide me by detail. Start by searching t

[gmx-users] residence time of water molecule and life time of hydrogen

2010-10-18 Thread atila petrosian
Hi gromacs users I am beginner in gromacs. I did md simulation of a protein by gromacs and now I want to obtain residence time of water molecule and life time of hydrogen bonds. Can I obtain both of them using gromacs? please guide me by detail. -- gmx-users mailing listgmx-users@gromacs.org

[gmx-users] residence time of water molecule

2010-06-30 Thread atila petrosian
Hi how to obtain residence time of water molecule using md simulation and gromacs? What is the best way to do this? Please suggest. -- atila -- gmx-users mailing listgmx-users@gromacs.org http://lists.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org