Hello, I'm very new to Gromacs, and I am interested in simulating the interactions of 2 hexadecane (C16H34) molecules in water (SPC/E specificall). I've spent some time experimenting with tutorials in Gromacs, but I've found little help in non-protein simulations like this one.
I have built topologies for hexadecane compatible with NAMD, so I figure I should be able to do the same in Gromacs but I'm fuzzy on how to go about doing so. I also don't know what forcefield I should be using for this sort of system. I'd greatly appreciate it if someone could give me some pointers on how to get started here. Thanks very much, Adam
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