Re: [gmx-users] storage problem during a simulation

2013-07-23 Thread Mark Abraham
gmxcheck can still read your output files safely. :-) On Tue, Jul 23, 2013 at 10:26 PM, Francesco wrote: > the simulations are still running, they should end tomorrow afternoon. > > Fra > > On Tue, 23 Jul 2013, at 06:26 PM, Mark Abraham wrote: >> What does gmxcheck have to say about your output f

Re: [gmx-users] storage problem during a simulation

2013-07-23 Thread Francesco
the simulations are still running, they should end tomorrow afternoon. Fra On Tue, 23 Jul 2013, at 06:26 PM, Mark Abraham wrote: > What does gmxcheck have to say about your output files? > On Jul 23, 2013 12:17 PM, "Francesco" wrote: > > > Hi all, > > This morning the gpu cluster that I'm using

Re: [gmx-users] storage problem during a simulation

2013-07-23 Thread Mark Abraham
What does gmxcheck have to say about your output files? On Jul 23, 2013 12:17 PM, "Francesco" wrote: > Hi all, > This morning the gpu cluster that I'm using had some troubles with the > network connection between nodes that deny access to the storage. > Now, the simulations are still running and

[gmx-users] storage problem during a simulation

2013-07-23 Thread Francesco
Hi all, This morning the gpu cluster that I'm using had some troubles with the network connection between nodes that deny access to the storage. Now, the simulations are still running and it seems that during the "shut down" mdrun wrote a lot of checkpoints and restarted the simulation once the com