On 5/2/13 7:33 AM, Mohan maruthi sena wrote:
Hi ,
Thanks for a quick reply. Sorry for not being clear, I want to
surround the peptide with just ions(sodium). How can I do this?
genbox -ci -nmol
You will need a coordinate file for a single Mg2+ ion to be inserted, which is
trivia
Hi ,
Thanks for a quick reply. Sorry for not being clear, I want to
surround the peptide with just ions(sodium). How can I do this?
Thanks,
Mohan
On Thu, May 2, 2013 at 4:58 PM, Justin Lemkul wrote:
>
>
> On 5/2/13 12:38 AM, Mohan maruthi sena wrote:
>
>> Hi all,
>> I hav
On 5/2/13 12:38 AM, Mohan maruthi sena wrote:
Hi all,
I have system consisting of a peptide(alpha-helix), I want the
peptide to be surrounded by magnesium ions(instead of water). How can i do
this gromacs? How can I find the concentration of magnesium ions. just like
in solution we
Hi all,
I have system consisting of a peptide(alpha-helix), I want the
peptide to be surrounded by magnesium ions(instead of water). How can i do
this gromacs? How can I find the concentration of magnesium ions. just like
in solution we have 0.5 Molar Mg+2 solution, My question how can
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