[gmx-users] trjconv -pbc nojump -center rect = does not work

Hi I have a protein+several ligand in the simulation box. After 5ns, the protein drift to the right edge of the box and the ligand drift to the left edge of the box. I am very sure that the ligand has attached to the protein. with this command = trjconv -pbc nojump -center rect so,

Re: [gmx-users] trjconv -pbc nojump -center rect = does not work

Chih-Ying Lin wrote: Hi I have a protein+several ligand in the simulation box. After 5ns, the protein drift to the right edge of the box and the ligand drift to the left edge of the box. I am very sure that the ligand has attached to the protein. with this command = trjconv -pbc