RE: [gmx-users] umbrella potential

2009-09-21 Thread Berk Hess
vt.edu > To: gmx-users@gromacs.org > Subject: Re: [gmx-users] umbrella potential > > > > Stefan Hoorman wrote: > > I have performed a series of umbrella sampling simulations in order to > > do a WHAM analysis. The profile.xvg file I obtain is a continuous > >

Re: [gmx-users] umbrella potential

2009-09-20 Thread Justin A. Lemkul
Stefan Hoorman wrote: I have performed a series of umbrella sampling simulations in order to do a WHAM analysis. The profile.xvg file I obtain is a continuous descending line along my distance axis. There is no increase in energy after my two structures separate. Perhaps I am doing something

[gmx-users] umbrella potential

2009-09-20 Thread Stefan Hoorman
I have performed a series of umbrella sampling simulations in order to do a WHAM analysis. The profile.xvg file I obtain is a continuous descending line along my distance axis. There is no increase in energy after my two structures separate. Perhaps I am doing something wrong. Thank you ___