Re: [gmx-users] which chain to select for MD simulation

2011-07-08 Thread bipin singh
mark.abra...@anu.edu.au > Fecha: 08-jul-2011 3:44 > Para: "Discussion list for GROMACS users" > Asunto: Re: [gmx-users] which chain to select for MD simulation > > > On 8/07/2011 4:52 PM, bipin singh wrote: > > Hello, > > > > My protein have two identical

Re: [gmx-users] which chain to select for MD simulation

2011-07-08 Thread felmer...@uchile.cl
. regards Felipe Mensaje original De: mark.abra...@anu.edu.au Fecha: 08-jul-2011 3:44 Para: "Discussion list for GROMACS users" Asunto: Re: [gmx-users] which chain to select for MD simulation On 8/07/2011 4:52 PM, bipin singh wrote: > Hello, > > My protein have two ident

Re: [gmx-users] which chain to select for MD simulation

2011-07-08 Thread Mark Abraham
On 8/07/2011 4:52 PM, bipin singh wrote: Hello, My protein have two identical chains A and B and the backbone rmsd between the two chains is 0.33A. My problem is that how to select(on what basis) one chain out of the two for md simulation, whether the selection of one of the two chains(A or B

[gmx-users] which chain to select for MD simulation

2011-07-07 Thread bipin singh
Hello, My protein have two identical chains A and B and the backbone rmsd between the two chains is 0.33A. My problem is that how to select(on what basis) one chain out of the two for md simulation, whether the selection of one of the two chains(A or B) will make any differences to the final resul