Re: [gmx-users] x2top & Encad all-atom force field (vacuum) not recognizing bonds

darre...@ece.ubc.ca wrote: Dear All, I have been trying to determine why I am experiencing problems when I run a gromacs file through x2top. I have checked my gromacs file with VMD to ensure that the file is correct and VMD validates that my file is correct as I see the intended structure. Thus,

[gmx-users] x2top & Encad all-atom force field (vacuum) not recognizing bonds

Dear All, I have been trying to determine why I am experiencing problems when I run a gromacs file through x2top. I have checked my gromacs file with VMD to ensure that the file is correct and VMD validates that my file is correct as I see the intended structure. Thus, the atoms are indeed located