Re: Aw: [gmx-users] Umbrella sampling - position restraints

2013-08-09 Thread suram417
Thanks Justin, Stephan. I am running both and will post my observations soon. -- View this message in context: http://gromacs.5086.x6.nabble.com/Umbrella-sampling-position-restraints-tp5010405p5010422.html Sent from the GROMACS Users Forum mailing list archive at Nabble.com. -- gmx-users mail

Aw: [gmx-users] Umbrella sampling - position restraints

2013-08-08 Thread lloyd riggs
it more accuratly represents reality (my opinion), but is not feasable with high energy affinities such as protein-protein or DNA-protein interactions with short (under u or m seconds) and is used as such (I assume) in many things, or you cant pull them apart.  A comparison however, would probably