Thanks mate, I am trying it now :)
-Original Message-
From: gmx-users-boun...@gromacs.org [mailto:gmx-users-boun...@gromacs.org] On
Behalf Of Trayder Thomas
Sent: Thursday, 11 July 2013 11:52 AM
To: Discussion list for GROMACS users
Subject: Re: [gmx-users] How to apply trjconv -nojump
VMD might do what you want with the PBC tools plugin (installed by
default). http://www.ks.uiuc.edu/Research/vmd/plugins/pbctools/
unwrap being the equivalent of -nojump
Otherwise, couldn't you just view your 2 trajectories simultaneously, one
with protein the other not?
-Trayder
On Wed, Jul 10
On 7/9/13 7:13 PM, Bin Liu wrote:
Hi All,
For the convenience of visualization, I need to remove the jump of one
component (say a protein) of the system at the boundary. I don't need to,
or say I need not to remove the jump of the other components (say a lipid
bilayer), since otherwise the sys
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