Re: Re: Re: [gmx-users] GPU-based workstation

2013-08-01 Thread Szilárd Páll
erties to the MB should I consider for such system ? >> >> James >> >> >> 2013/5/28 lloyd riggs >> >>> Dear Dr. Pali, >>> >>> Thank you, >>> >>> Stephan Watkins >>> >>> *Gesendet:* Dienstag, 28. Mai 2013 um

Re: Re: Re: [gmx-users] GPU-based workstation

2013-06-27 Thread James Starlight
kins >> >> *Gesendet:* Dienstag, 28. Mai 2013 um 19:50 Uhr >> *Von:* "Szilárd Páll" >> >> *An:* "Discussion list for GROMACS users" >> *Betreff:* Re: Re: [gmx-users] GPU-based workstation >> Dear all, >> >> As far as I un

Re: Re: Re: [gmx-users] GPU-based workstation

2013-05-28 Thread James Starlight
the MB should I consider for such system ? James 2013/5/28 lloyd riggs > Dear Dr. Pali, > > Thank you, > > Stephan Watkins > > *Gesendet:* Dienstag, 28. Mai 2013 um 19:50 Uhr > *Von:* "Szilárd Páll" > > *An:* "Discussion list for GROMACS users"

Aw: Re: Re: [gmx-users] GPU-based workstation

2013-05-28 Thread lloyd riggs
Dear Dr. Pali,   Thank you,   Stephan Watkins   Gesendet: Dienstag, 28. Mai 2013 um 19:50 Uhr Von: "Szilárd Páll" An: "Discussion list for GROMACS users" Betreff: Re: Re: [gmx-users] GPU-based workstation Dear all, As far as I understand, the OP is interested in h

Re: Aw: Re: [gmx-users] GPU-based workstation

2013-05-28 Thread Szilárd Páll
mx.ch>> > Reply-To: Discussion users > mailto:gmx-users@gromacs.org>> > Date: Saturday, 25 May 2013 12:02 > To: Discussion users mailto:gmx-users@gromacs.org>> > Subject: Aw: Re: [gmx-users] GPU-based workstation > > More RAM the better, and the best I have s

Re: Re: [gmx-users] GPU-based workstation

2013-05-28 Thread Szilárd Páll
for 1 ns sim, but tried simple large 800 amino, 25,000 solvent > eq (NVT or NPT) runs and they clock at around 1 hour real for say 50 ps > eq's > > Stephan > > Gesendet: Samstag, 25. Mai 2013 um 07:54 Uhr > Von: "James Starlight" > An: "Discussion

Re: Re: Re: [gmx-users] GPU-based workstation

2013-05-27 Thread James Starlight
r > *Von:* "James Starlight" > > *An:* "Discussion list for GROMACS users" > *Betreff:* Re: Aw: Re: [gmx-users] GPU-based workstation > Richard, > > thanks for suggestion! > > Assuming that I'm using 2 high end GeForce's what performance b

Aw: Re: Re: [gmx-users] GPU-based workstation

2013-05-25 Thread lloyd riggs
o the exact same performance the other person had.   Stephan Gesendet: Samstag, 25. Mai 2013 um 15:19 Uhr Von: "James Starlight" An: "Discussion list for GROMACS users" Betreff: Re: Aw: Re: [gmx-users] GPU-based workstation Richard, thanks for suggestion! Assuming that I

Aw: Re: Re: [gmx-users] GPU-based workstation

2013-05-25 Thread lloyd riggs
arlight" An: "Discussion list for GROMACS users" Betreff: Re: Aw: Re: [gmx-users] GPU-based workstation Richard, thanks for suggestion! Assuming that I'm using 2 high end GeForce's what performance be better 1) in case of one i7 (4 or 6 nodes ) ? 2) in case of 8 core

Re: Aw: Re: [gmx-users] GPU-based workstation

2013-05-25 Thread James Starlight
; Reply-To: Discussion users gmx-users@gromacs.org>> > Date: Saturday, 25 May 2013 12:02 > To: Discussion users mailto:gmx-users@gromacs.org>> > Subject: Aw: Re: [gmx-users] GPU-based workstation > > More RAM the better, and the best I have seen is 4 GPU work statio

Re: Aw: Re: [gmx-users] GPU-based workstation

2013-05-25 Thread Broadbent, Richard
E5 or core i7 would be a good choice. Richard From: lloyd riggs mailto:lloyd.ri...@gmx.ch>> Reply-To: Discussion users mailto:gmx-users@gromacs.org>> Date: Saturday, 25 May 2013 12:02 To: Discussion users mailto:gmx-users@gromacs.org>> Subject: Aw: Re: [gmx-users] GPU-based works

Aw: Re: [gmx-users] GPU-based workstation

2013-05-25 Thread lloyd riggs
r real for say 50 ps eq's   Stephan   Gesendet: Samstag, 25. Mai 2013 um 07:54 Uhr Von: "James Starlight" An: "Discussion list for GROMACS users" Betreff: Re: [gmx-users] GPU-based workstation Dear Dr. Watkins! Thank you for the suggestions! In the local shops I

Re: [gmx-users] GPU-based workstation

2013-05-25 Thread James Starlight
Dear Dr. Watkins! Thank you for the suggestions! In the local shops I've found only Core i7 with 6 cores (like Core i7-39xx) and 4 cores. Should I obtain much better performance with 6 cores than with 4 cores in case of i7 cpu (assuming that I run simulation in cpu+gpu mode )? Also you've ment