Re: [gpc-informatics] #280: Medication ontology orgainzed by ingredient

Hi, A "contrib" repo in SCILHS works for me. It gives me a place to put this ... and a place for you to take a look at it, etc. Jay Pedersen, M.A. Department of Pathology/Microbiology University of Nebraska Medical Center 985900 Nebraska Medical Center Omaha NE 68198-5900 402-559-9487 (office

Re: [gpc-informatics] #280: Medication ontology orgainzed by ingredient

Might make more sense for you guys to have your own GitHub for the time being, and we could link to it. Or if you prefer, I’d be happy to set up a “contrib” repo in SCILHS that you could commit to. Thanks, Jeff Klann From: "Pedersen, Jay G" Date: Monday, April 24, 2017 at 10:28 PM To: Dan Conn

Re: [gpc-informatics] #280: Medication ontology orgainzed by ingredient

Hi, I wasn't sure where to put the code in github. I believe we are glad to share the code, which is written in python and uses web services from the NLM and an input file with history information of RxNorm codes received from the NLM. Where would be the appropriate spot to put that? I tho

Re: [gpc-informatics] #280: Medication ontology orgainzed by ingredient

Yes, it's on babel. But Jim wrote that you were sharing it via git as well. Not so? On Apr 24, 2017 7:44 PM, "Pedersen, Jay G" wrote: Hi, The Medication ontology exists in BABEL, at folder UNMC: SCILHS, in the Medications subfolder. I tried it moments ago, and it still opened VERY slow. S

Re: [gpc-informatics] #280: Medication ontology orgainzed by ingredient

Hi, The Medication ontology exists in BABEL, at folder UNMC: SCILHS, in the Medications subfolder. I tried it moments ago, and it still opened VERY slow. So ... I include links to a couple of pictures taken from BABEL that shows the metadata -- from the VA class level through the RxNorm c

RE: U of Missouri HC's r004 approved

Thanks Russ. Regards, Dr. Abu Saleh Mohammad Mosa, MS, PhD Director, Research Informatics University of Missouri School of Medicine Assistant Research Professor of Health Informatics Health Management and Informatics One Hospital Drive, NW505, DC018.00 Columbia, MO 65212 Phone: 573-882-8349 Email:

Re: Indiana Regenstrief's r005 approved

Excellent news! Thanks to Bill, Tony, and everyone involved in making this happen. Thank you, Shaun From: Russ Waitman Date: Monday, April 24, 2017 at 3:59 PM To: "French, Tony" , "Hood, Daniel Robert" , Laurel Verhagen , "greenlee.robert" Cc: "Barnett, William Kinne" , "Grannis, Shaun J"

RE: Indiana Regenstrief's r005 approved

Congrats Tony and Dan, Russ Waitman, PhD Director of Medical Informatics Associate Vice Chancellor for Enterprise Analytics Professor, Department of Internal Medicine University of Kansas Medical Center, Kansas City, Kansas 913-945-7087 (office) rwait...@kumc.edu http://

RE: U of Missouri HC's r004 approved

Just super! Jerry From: Russ Waitman [mailto:rwait...@kumc.edu] Sent: Monday, April 24, 2017 1:50 PM To: Mosa, Abu S. ; Laurel Verhagen ; greenlee.robert Cc: GPC-DEV@LISTSERV.KUMC.EDU; Parker, Jerry C. Subject: RE: U of Missouri HC's r004 approved Great news Mosa! Russ From: PCORnet DRN O

AdapterMappings: why 1-to-many?

Why do some entries in `AdapterMappings.xml` have more than one value? For example: \\SHRINE\i2b2\Demographics\Age\ \\HIMC_DEMOGRAPHICS\i2b2\Demographics\Age\0-9 years old\

RE: U of Missouri HC's r004 approved

Great news Mosa! Russ From: PCORnet DRN OC [mailto:dr...@pcornet.org] Sent: Monday, April 24, 2017 1:18 PM To: Mosa, Abu S.; Laurel Verhagen; greenlee.robert; Russ Waitman Cc: James Topping; Laura Qualls; Darcy Louzao, Ph.D. Subject: U of Missouri HC's r004 approved Good afternoon. I’m happy t

gpc-dev 25 Apr agenda and meeting notes

What else for tomorrow? It's pretty quiet out there... :) * 25 Apr gpc-dev shared notes; scribe: UMN 1. Convene, take roll, review records and plan next meeting(s)

Re: [gpc-informatics] #280: Medication ontology orgainzed by ingredient

Yes, I have not seen it either. Please point us to it, thanks. On 4/24/17, 11:59 AM, "GPC Informatics" wrote: #280: Medication ontology orgainzed by ingredient -+ Reporter: preeder | Owner: jay.pedersen Type:

Re: [gpc-informatics] #583: SNOW SCILHS Lab Metadata Expansion

#583: SNOW SCILHS Lab Metadata Expansion ---+--- Reporter: campbell | Owner: campbell Type: enhancement| Status: assigned Priority: major

Re: [gpc-informatics] #280: Medication ontology orgainzed by ingredient

#280: Medication ontology orgainzed by ingredient -+ Reporter: preeder | Owner: jay.pedersen Type: enhancement | Status: assigned Priority: major| Milestone: snow-shrine-2 Component: data-stds| Resolut

FW: Children's Mercy's r004 approved

CMH is approved. From: PCORnet DRN OC [mailto:dr...@pcornet.org] Sent: Monday, April 24, 2017 10:44 AM To: Fothergill, Rita, R ; Laurel Verhagen ; greenlee.robert ; Russ Waitman Cc: James Topping ; Laura Qualls ; Darcy Louzao, Ph.D. Subject: Children's Mercy's r004 approved *** This message

Re: Med Coll Wisconsin's r003 approved

Awesome! Russ Waitman > On Apr 24, 2017, at 9:00 AM, Kowalski, George wrote: > > We’ve been approved. > > From: "Kowalski, George" > Date: Monday, April 24, 2017 at 8:44 AM > To: CRDW > Subject: FW: Med Coll Wisconsin's r003 approved > > > > From: PCORnet DRN OC > Date: Monday, April 2

FW: Med Coll Wisconsin's r003 approved

We’ve been approved. From: "Kowalski, George" Date: Monday, April 24, 2017 at 8:44 AM To: CRDW Subject: FW: Med Coll Wisconsin's r003 approved From: PCORnet DRN OC Date: Monday, April 24, 2017 at 8:43 AM To: "Osinski, Kristen" , "Kowalski, George" , LAUREL VERHAGEN , "greenlee.robert" , Ru