[gmx-users] Gromacs Tutorial

2016-01-20 Thread João Rodrigues
Dear all, Those of you who read the paper will realize that we do acknowledge Tsjerk, and keep doing so on the web pages of the material, but there are reasons we considered sufficient to justify the author listing on the paper. However, since Tsjerk knows me and the other authors (them actually

Re: [gmx-users] g_tune_pme scalevdw option not working?

2014-03-14 Thread João Rodrigues
, Carsten On 13 Mar 2014, at 18:27, João Rodrigues anar...@gmail.com wrote: Hi Carsten, Thanks for the reply and for the info on the rlist modification. I created the bug report - http://redmine.gromacs.org/issues/1460 - and assigned it to you. I also set the priority to low, don't know

Re: [gmx-users] g_tune_pme scalevdw option not working?

2014-03-14 Thread João Rodrigues
Checked. Fixed. Thanks again! João 2014-03-14 14:03 GMT+01:00 João Rodrigues anar...@gmail.com: Hi Carsten, Thanks for the fix! Will run it today and get back to you with the results. Cheers, João 2014-03-14 12:32 GMT+01:00 Carsten Kutzner ckut...@gwdg.de: Dear João, could you

[gmx-users] g_tune_pme scalevdw option not working?

2014-03-13 Thread João Rodrigues
Hi all, I've been playing with g_tune_pme (neat tool!) for the last couple of days. If I understood correctly, it can also be used to iterate over different rcoulomb values using the -rmin and -rmax options. Using the Verlet scheme requires rvdw = rcoulomb, so I used the -scalevdw option (which

Re: [gmx-users] g_tune_pme scalevdw option not working?

2014-03-13 Thread João Rodrigues
...@gwdg.de: Dear João, On 13 Mar 2014, at 14:38, João Rodrigues anar...@gmail.com wrote: Hi all, I've been playing with g_tune_pme (neat tool!) for the last couple of days. If I understood correctly, it can also be used to iterate over different rcoulomb values using the -rmin and -rmax