[gmx-users] -bash: ngmx: command not found

2017-06-15 Thread Karchevskaya, Anastasia
Dear Gromacs Users, I can’t run ngmx. Gromacs version 4-6-7; tried to re-install already. Machine: Mac (OS Sierra) X11/XQuartz: XQuartz 2.7.11 (xorg-server 1.18.4) Lesstif: lesstif 0.95.2 Installed with brew What else should I do to make it work? What am I doing wrong? Thank you Ana -- Grom

[gmx-users] The spacing of the decimal points in file is not consistent

2017-03-01 Thread Karchevskaya, Anastasia
Dear GMX users, I have already checked the archive but the solution provided didn’t work for me. I am trying to simulate the membrane assembly/rafts/behaviour using gromacs and martini force field. So, using Martini and their tool called insane, I could assemble a complex membrane with the diff