).
I have also tried to calculate just the number and perform the calculation
with gmx analyze using the -luzar option but again I have segmentation
fault...
Can anyone tell me if I am doing something wrong and how to follow the
right procedure?
Thanks a lot in avvance.
Valerio Ferrario
_
> Erik Marklund, PhD, Marie Skłodowska Curie INCA Fellow
> Department of Chemistry – BMC, Uppsala University
> +46 (0)18 471 4539
> erik.markl...@kemi.uu.se<mailto:erik.markl...@kemi.uu.se>
>
> On 29 Aug 2017, at 13:52, Valerio Ferrario <valerio.
Dear all,
I am trying to obtain parameters for h-bonds. I used the tool gmx hbonds
with -ac option but resulted in segmentation fault. Therefore from the
normal gmx hbond output I used gmx analyze to obtain the autocorrelation
function. Therefore, using again gmx analyze with -luzar options and
---
> When the only tool you own is a hammer, every problem begins to resemble a
> nail.
>
>
> On 28 June 2017 at 01:45, Valerio Ferrario <valerio.ferra...@gmail.com>
> wrote:
> > Dear Users,
> >
> > I am trying to use the gmx spatial tool in ord
that the density should be just around the protein (in this case).
Moreover I have just positive values for the isosurface, is that normal? Am
I doing something wrong?
Thanks a lot,
Valerio Ferrario
--
Gromacs Users mailing list
* Please search the archive at
http://www.gromacs.org/Support/Mailing_Lists/GMX
