Re: [gmx-users] AVX related compiler error during build with P100 RHEL7

2017-11-07 Thread Tru Huynh
On Mon, Nov 06, 2017 at 04:41:08PM -0800, Guyen Gn wrote: > Getting back to this thread after a while, is this the name of package?: > rpmdevtools.noarch 8.3-5.el7 Server > Red Hat Enterprise Linux Server release 7.3 (Maipo) > > I see it is included in the RH7

Re: [gmx-users] AVX related compiler error during build with P100 RHEL7

2017-11-06 Thread Mark Abraham
Hi, I suggest using the installation procedure on the link I already provided. Mark On Tue, 7 Nov 2017 01:41 Guyen Gn wrote: > Getting back to this thread after a while, is this the name of package?: > rpmdevtools.noarch 8.3-5.el7 Server > Red Hat Enterpri

Re: [gmx-users] AVX related compiler error during build with P100 RHEL7

2017-11-06 Thread Guyen Gn
Getting back to this thread after a while, is this the name of package?: rpmdevtools.noarch 8.3-5.el7 Server Red Hat Enterprise Linux Server release 7.3 (Maipo) I see it is included in the RH7.3 Thanks., On Wed, Aug 2, 2017 at 6:10 PM, Mark Abraham wrote:

Re: [gmx-users] AVX related compiler error during build with P100 RHEL7

2017-08-02 Thread Mark Abraham
Hi, Usually this means, like it says, that the linker isn't able to do the required job. I don't know whether the stock RHEL 7.2 linker can, but I imagine that's the issue. Usually using a devtoolset e.g. https://www.softwarecollections.org/en/scls/rhscl/devtoolset-4/ is the way to get a machine w

Re: [gmx-users] AVX related compiler error during build with P100 RHEL7

2017-08-02 Thread Guyen Gn
Any update on this one?? On Fri, Jul 14, 2017 at 1:30 PM, Guyen Gn wrote: > Any ideas on this one? Thanks! > > On Mon, Jul 3, 2017 at 9:33 PM, Guyen Gn wrote: > >> Still did not work. change xMIC to xCore and log is below (if it was >> other way around, then originally it must have not worked).

Re: [gmx-users] AVX related compiler error during build with P100 RHEL7

2017-07-14 Thread Guyen Gn
Any ideas on this one? Thanks! On Mon, Jul 3, 2017 at 9:33 PM, Guyen Gn wrote: > Still did not work. change xMIC to xCore and log is below (if it was other > way around, then originally it must have not worked). > Script file is all oneline. > > -- Performing Test C_xCORE_AVX512_FLAG_WORKS > --

Re: [gmx-users] AVX related compiler error during build with P100 RHEL7

2017-07-03 Thread Guyen Gn
Still did not work. change xMIC to xCore and log is below (if it was other way around, then originally it must have not worked). Script file is all oneline. -- Performing Test C_xCORE_AVX512_FLAG_WORKS -- Performing Test C_xCORE_AVX512_FLAG_WORKS - Failed -- Performing Test C_mavx512f_mfma_FLAG_WO

Re: [gmx-users] AVX related compiler error during build with P100 RHEL7

2017-07-03 Thread Mark Abraham
Hi, On Mon, Jul 3, 2017 at 10:50 PM Guyen Gn wrote: > Sorry for long wait on response, basically i followed the instruction at > nvidia website: > > http://www.nvidia.com/object/gromacs-installation.html > > I instaled GPU driver versoin 369, as well as CUDA, gcc, cmake. After that > it tells to

Re: [gmx-users] AVX related compiler error during build with P100 RHEL7

2017-07-03 Thread Guyen Gn
Sorry for long wait on response, basically i followed the instruction at nvidia website: http://www.nvidia.com/object/gromacs-installation.html I instaled GPU driver versoin 369, as well as CUDA, gcc, cmake. After that it tells to run following: CC=gcc CXX=g++ cmake -DGMX_OPENMP=ON -DGMX_GPU=ON

Re: [gmx-users] AVX related compiler error during build with P100 RHEL7

2017-06-19 Thread Mark Abraham
Hi, We can't support third party build guides, but please follow ours and ask questions about it here. Provide full details. Mark On Mon, 19 Jun 2017 23:39 Guyen Gn wrote: > I have used the Nvidia's gromacs page to buid and run the gromacs. > Few months back, I have used the Xeon CPU to build

[gmx-users] AVX related compiler error during build with P100 RHEL7

2017-06-19 Thread Guyen Gn
I have used the Nvidia's gromacs page to buid and run the gromacs. Few months back, I have used the Xeon CPU to build and run successfully on RHEL7.2. This also used the M6 GPU card. Now the same build is failing with AVX related compiler error if I use latest Skylake processor and P100 GPU. I have