On 2/26/15 5:39 PM, Thomas Lipscomb wrote:
Dear gmx-users,
Ok I understand. My specific question is how do I do these two tasks:
1. What do I need to change about the KALP15 with DPPC tutorial (again
substituting maximin 3 for KALP15) so that when I repeat it I get better data,
because some
Dear gmx-users,
Ok I understand. My specific question is how do I do these two tasks:
1. What do I need to change about the KALP15 with DPPC tutorial (again
substituting maximin 3 for KALP15) so that when I repeat it I get better data,
because some parts of the tutorial are just for practice and
On 2/24/15 10:18 PM, Thomas Lipscomb wrote:
Dear gmx-users,
Ok Justin here is the information you asked for:
My questions were rhetorical. I honestly don't have time to through all of this
and tell you how to do a thesis project :)
If you have specific questions about using GROMACS to ca
Dear gmx-users,
Ok Justin here is the information you asked for:
See Figure 3 for the antimcirobial bacterial-type membrane disruption models
that the antimicrobial peptide maximin 3 might be using. Note that all models
require the interaction of several maximin 3 molecules not just one versus
On 2/23/15 6:13 PM, Thomas Lipscomb wrote:
Dear gmx-users,
I have finished the KALP15 in DPPC tutorial up to completing the molecular
dynamics but not any of the
analysis:http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin/gmx-tutorials/membrane_protein/09_analysis.html
I made one chang
Dear gmx-users,
I have finished the KALP15 in DPPC tutorial up to completing the molecular
dynamics but not any of the
analysis:http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin/gmx-tutorials/membrane_protein/09_analysis.html
I made one change to the tutorial: using one maximin 3 molecule
