Re: [gmx-users] Equilibration of Lipid Bilayers created through charmm-gui

2017-07-18 Thread Justin Lemkul
On 7/17/17 2:14 PM, Nidhin Thomas wrote: Hello everyone, I have created an 'alpha-helix protein embedded in a lipid bilayer’ system using charmm-gui. I used the mdp files provided by charmm-gui directly without changing the number of steps or constraints for equilibration. I ran final simu

[gmx-users] Equilibration of Lipid Bilayers created through charmm-gui

2017-07-17 Thread Nidhin Thomas
Hello everyone, I have created an 'alpha-helix protein embedded in a lipid bilayer’ system using charmm-gui. I used the mdp files provided by charmm-gui directly without changing the number of steps or constraints for equilibration. I ran final simulation for 200 ns without any constraints an