You might try the ATB website
http://atb.uq.edu.au/molecule.py?molid=368385#panel-md
you can create the lipid and submit your pdb ,but most likely it already
exists in their data base. Use the modified Gromos54a7 ff and the pdb and itp
provided by ATB..
Good luck !
Paul
> On Nov 4,
On 11/4/19 9:05 AM, daniel depope wrote:
I want to simulate POPE/POPG bilayer with gromos54a7 ff (expanded with
lipids parts, as explained in Lemkul's kalp tutorial).
1. I tried CHARMM-gui website - I got bilayer in step 5, but can't finalize
because there are no gromos ff option. So I
I want to simulate POPE/POPG bilayer with gromos54a7 ff (expanded with
lipids parts, as explained in Lemkul's kalp tutorial).
1. I tried CHARMM-gui website - I got bilayer in step 5, but can't finalize
because there are no gromos ff option. So I looked for pope and popg
gromos54a7 topology, but
