Re: [gmx-users] How to put excipients into the simulation box?

2017-04-09 Thread Mark Abraham
Hi, Using gmx insert-molecules before you solvate is a useful friend here. Mark On Sun, 9 Apr 2017 17:58 ZHANG Cheng <272699...@qq.com> wrote: > Dear Gromacs Researchers, > Can I ask how to put excipients (e.g. sucrose, trehalose) into the > simulation box together with protein, salt and

[gmx-users] How to put excipients into the simulation box?

2017-04-09 Thread ZHANG Cheng
Dear Gromacs Researchers, Can I ask how to put excipients (e.g. sucrose, trehalose) into the simulation box together with protein, salt and water? Those excipients do not strongly interact with proteins, so they could not be treated as protein-ligand complex. I learned how to prepare the