Hi,
I am running a pulling simulation with implicit solvent using Gromacs
4.5.5, single precision on 8 CPU, with OPLS-AA FFT.
The system is equilibrated for 10 ns, with pbc=0 and infinite cut-off (
.mdp file is posted). I do not get any LINC errors for the equilibration,
however when I start pu
Hi,
I am running a pulling simulation with implicit solvent using Gromacs
4.5.5, single precision on 8 CPU, with OPLS-AA FFT.
The system is equilibrated for 10 ns, with pbc=0 and infinite cut-off
(.mdp file is posted). I do not get any LINC errors for the
equilibration, however when I start pull
Hi,
I am running a pulling simulation with implicit solvent using Gromacs
4.5.5, single precision on 8 CPU, with OPLS-AA FFT.
The system is equilibrated for 10 ns, with pbc=0 and infinite cut-off
(.mdp file is posted). I do not get any LINC errors for the
equilibration, however when I start pull