Re: [gmx-users] Nonequilibrium simulations

I just reread my e-mail and realized that it was posed as a statement and not a question. What I meant was: When I run non-equilibrium simulations in the Gromacs code using "acc-groups", is the additional acceleration considered to contribute to the temperature when velocities are adjusted or

[gmx-users] Nonequilibrium simulations

Hello, I am running non-equilibrium simulations using the "acc-groups" command and the Nose-Hoover thermostat. I just wanted to confirm that in Gromacs code this additional acceleration is not considered to contribute to the temperature when velocities are adjusted. Thank you! Jon -- Gromacs