Re: [gmx-users] Order in which gromacs calculates non-bonded parameters

2017-04-03 Thread Mark Abraham
Hi, Offhand, gen-pairs won't work without matching pairtypes, but nonbond_params will override anything that might have been looked up from pairtypes. Mark On Mon, Apr 3, 2017 at 2:39 PM Vries, de, H.W. < h.w.de.vrie...@student.rug.nl> wrote: > Dear all, > > I was wondering: what priority does

[gmx-users] Order in which gromacs calculates non-bonded parameters

2017-04-03 Thread Vries, de, H.W.
Dear all, I was wondering: what priority does GROMACS use for comparing [nonbond_params], [pairtypes], and gen-pairs-based cross-terms? I.e., are pairtypes additive to gen-pairs, with nonbond_params overwriting any cross-term defined through cross-terms? The reason I am asking is that I am