Re: [gmx-users] Relative binding free energy from a neutral to a charged molecule

2016-05-06 Thread hannes.loeffler
] on behalf of Christopher Neale [chris.ne...@alum.utoronto.ca] Sent: 07 May 2016 06:16 To: gmx-us...@gromacs.org Subject: Re: [gmx-users] Relative binding free energy from a neutral to a charged molecule Maybe this: http://scitation.aip.org/content/aip/journal/jcp/124/22/10.1063/1.2201698

Re: [gmx-users] Relative binding free energy from a neutral to a charged molecule

2016-05-06 Thread Christopher Neale
th.se on behalf of Stefania Evoli Sent: 03 May 2016 08:33:15 To: gmx-us...@gromacs.org Subject: [gmx-users] Relative binding free energy from a neutral to a charged molecule Dear Users, I’m trying to perform relative binding free energy calculations for the transformation from a neutral to

[gmx-users] Relative binding free energy from a neutral to a charged molecule

2016-05-03 Thread Stefania Evoli
Dear Users, I’m trying to perform relative binding free energy calculations for the transformation from a neutral to a charged molecule. I know reading several articles that this kind of transformations are affected by artifacts due to the used effective electrostatic interaction function and a