Re: [gmx-users] Restarting crashed simulation

2017-11-18 Thread Mark Abraham
Hi, Looks like you made a typo with state.cpt and that you perhaps have multiple mdrun processes running such that the actual output file is in one of the backup files labelled with # characters. Mark On Fri, 17 Nov 2017 19:37 Ali Ahmed wrote: > Hello GROMACS users > My MD simulation was crash

[gmx-users] Restarting crashed simulation

2017-11-17 Thread Ali Ahmed
Hello GROMACS users My MD simulation was crashed then I restarted the simulation from the point when the point was written using this command on 64 processors: mpirun -np 64 mdrun_mpi -s md.tpr -cpi stat.cpt After few days I got nothing in the folder usch as output.gro and I got the following ___

Re: [gmx-users] Restarting crashed simulation

2015-01-01 Thread bharat gupta
Hi, My simulation stopped because of power outage and I restarted it using the command: mpirun -np 32 mdrun_mpi -cpi mdrun.cpt -s mdrun.cpt It shows correctly the restarting time point, however the mdrun.log is not getting updated and I don't know how to verify whether the simulation is being co