Re: [gmx-users] Secondary structure content

2017-09-09 Thread Sundari
al Research Associate >>>> University of Tennessee/Oak Ridge National Laboratory >>>> Center for Molecular Biophysics >>>> >>>> >>>> From: gromacs.org_gmx-users-boun...@maillist.sys.kth.se < >

Re: [gmx-users] Secondary structure content

2017-09-09 Thread Justin Lemkul
n behalf of Sundari < sundi6...@gmail.com> Sent: Saturday, September 09, 2017 5:48 AM To: gromacs.org_gmx-users@maillist.sys.kth.se Subject: [gmx-users] Secondary structure content Dear all, I am confused with 'dssp' output graph i.e "number of residues vs time". Is

Re: [gmx-users] Secondary structure content

2017-09-09 Thread nidhi
Associate >>> University of Tennessee/Oak Ridge National Laboratory >>> Center for Molecular Biophysics >>> >>> ____________ >>> From: gromacs.org_gmx-users-boun...@maillist.sys.kth.se < >>> gromacs.org_gmx-users-bou

Re: [gmx-users] Secondary structure content

2017-09-09 Thread nidhi
aillist.sys.kth.se < >> gromacs.org_gmx-users-boun...@maillist.sys.kth.se> on behalf of Sundari < >> sundi6...@gmail.com> >> Sent: Saturday, September 09, 2017 5:48 AM >> To: gromacs.org_gmx-users@maillist.sys.kth.se >> Subject: [gmx-users] Secondary structure

Re: [gmx-users] Secondary structure content

2017-09-09 Thread Justin Lemkul
National Laboratory Center for Molecular Biophysics From: gromacs.org_gmx-users-boun...@maillist.sys.kth.se on behalf of Sundari Sent: Saturday, September 09, 2017 5:48 AM To: gromacs.org_gmx-users@maillist.sys.kth.se Subject: [gmx-users] Secondary structu

Re: [gmx-users] Secondary structure content

2017-09-09 Thread Smith, Micholas D.
Biophysics From: gromacs.org_gmx-users-boun...@maillist.sys.kth.se on behalf of Sundari Sent: Saturday, September 09, 2017 5:48 AM To: gromacs.org_gmx-users@maillist.sys.kth.se Subject: [gmx-users] Secondary structure content Dear all, I am confused with 'dssp' output

[gmx-users] Secondary structure content

2017-09-09 Thread Sundari
Dear all, I am confused with 'dssp' output graph i.e "number of residues vs time". Is it also called "secondary structure content(%) vs time" ?? Or it is different term? please, anyone help me to solve this confusion or send me any link contained proper definition of these two. Thanks in advance