Re: [gmx-users] Secondary structure not visible after converting from .gro to .pdb

2014-05-28 Thread bharat gupta
Hi, I energy minimized a protein consisting 10 chains using gromacs. When I converted the structure of the protein from gro format to pdb format to visualize in Pymol, it shows only one chain in ribbon form and rest of the chains are not shown ... How to rectify this error ?? Regards - Bhara

Re: [gmx-users] Secondary structure not visible after converting from .gro to .pdb

2014-05-28 Thread Justin Lemkul
On 5/28/14, 9:24 PM, bharat gupta wrote: Hi, I energy minimized a protein consisting 10 chains using gromacs. When I converted the structure of the protein from gro format to pdb format to visualize in Pymol, it shows only one chain in ribbon form and rest of the chains are not shown ... How t

Re: [gmx-users] Secondary structure not visible after converting from .gro to .pdb

2014-05-28 Thread Christopher Neale
iling list. Chris. From: gromacs.org_gmx-users-boun...@maillist.sys.kth.se on behalf of bharat gupta Sent: 28 May 2014 21:24 To: Discussion list for GROMACS users Subject: Re: [gmx-users] Secondary structure not visible after converting from .gro to .p