Re: [gmx-users] There is no domain decomposition for n nodes that is compatible with the given box and a minimum cell size of x nm

2017-11-29 Thread Justin Lemkul
On 11/29/17 5:43 PM, MD wrote: Hi folks, I got a fatal error when running em.mdp. Do you think if it is the .mdp that is causing this issue? My command line is : gmx mdrun -v -deffnm em The Fatal error: "There is no domain decomposition for 40 ranks that is compatible with the given box

[gmx-users] There is no domain decomposition for n nodes that is compatible with the given box and a minimum cell size of x nm

2017-11-29 Thread MD
Hi folks, I got a fatal error when running em.mdp. Do you think if it is the .mdp that is causing this issue? My command line is : gmx mdrun -v -deffnm em The Fatal error: "There is no domain decomposition for 40 ranks that is compatible with the given box and a minimum cell size of 2.42098