Re: [gmx-users] compiling 2018.3 ... problems with hwloc

2018-09-27 Thread Michael Brunsteiner
figured it out ... hwloc version 2.0.2 was too new ... oncei used hwloc-1.11.11 instead things worked ... mic -- Gromacs Users mailing list * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before posting! * Can't post? Read http://www.gromacs.org/Supp

[gmx-users] compiling 2018.3 ... problems with hwloc

2018-09-27 Thread Michael Brunsteiner
Hi, In the past I compiled gmx 2016.4 on our old cluster and this worked as expected. Now I just compiled 2018.3 only to find that the resulting binary was unexpectedly slow ... On each node I have a multi-core architecture with 12 logical threads, but htop shows that gmx uses only one thread.