[gmx-users] generating full atomic structure

Dear all, I got a pdb file including the C-alpha itoms of different residues only. Is there any software that can add the other atoms of the residues to the pdb file automatically? Thanks in advance, Ming -- Gromacs Users mailing list * Please search the archive at http://www.gromacs.org/Su

Re: [gmx-users] generating full atomic structure

if your file is missing only the hydrogens, openbabel can add them for you. If your file is missing heavier atoms, I don't know. Hope this helps Victor 2015-04-13 2:00 GMT-05:00 Ming Tang : > Dear all, > > I got a pdb file including the C-alpha itoms of different residues only. Is > there any

Re: [gmx-users] generating full atomic structure

Thanks. It contains alpha carbons only. Sent from my Huawei Mobile Victor Rosas Garcia wrote: if your file is missing only the hydrogens, openbabel can add them for you. If your file is missing heavier atoms, I don't know. Hope this helps Victor 2015-04-13 2:00 GMT-05:00 Ming Tang : > Dear

Re: [gmx-users] generating full atomic structure

Hi, There are some suggestions on the GROMACS website. Mark On 13/04/2015 9:01 am, "Ming Tang" wrote: > Dear all, > > I got a pdb file including the C-alpha itoms of different residues only. > Is there any software that can add the other atoms of the residues to the > pdb file automatically? >