Re: [gmx-users] linking lipid covalently to protein...

2014-08-18 Thread Dr. Vitaly Chaban
Nohow. Because the peptide is not covalently bound to the lipid. Dr. Vitaly V. Chaban Виталий Витальевич ЧАБАН On Tue, Aug 12, 2014 at 6:57 PM, Ozbil, Mehmet wrote: > Hello, > > > I am trying to run a GROMACS simulation with few amino acids covalently bound > to Palmitoyl-linoleylphosphat

[gmx-users] linking lipid covalently to protein...

2014-08-12 Thread Ozbil, Mehmet
Hello, I am trying to run a GROMACS simulation with few amino acids covalently bound to Palmitoyl-linoleylphosphatidylcholine molecules., by using GROMOS ff. I found the lipid structure and parameters on Tieleman`s website, but I don`t know how to get the parameters for covalently bound molecu