Re: [gmx-users] make a rigid nanoparticle (internally freeze body while it can move as a rigid body )

2018-05-31 Thread Samieegohar, Mohammadreza
. From: gromacs.org_gmx-users-boun...@maillist.sys.kth.se on behalf of Mark Abraham Sent: Tuesday, May 22, 2018 11:23:35 AM To: gmx-us...@gromacs.org Cc: gromacs.org_gmx-users@maillist.sys.kth.se Subject: Re: [gmx-users] make a rigid nanoparticle (internally freeze body while it

Re: [gmx-users] make a rigid nanoparticle (internally freeze body while it can move as a rigid body )

2018-05-22 Thread Mark Abraham
Hi, This cannot be done with GROMACS, there is no general support for rigid body motion. Mark On Tue, May 22, 2018 at 5:15 PM Samieegohar, Mohammadreza < mohammadreza.sam...@howard.edu> wrote: > Hi > I need to make a rigid Gold nanoparticle to run a coarse grained > simulation. my gold nanopart

[gmx-users] make a rigid nanoparticle (internally freeze body while it can move as a rigid body )

2018-05-22 Thread Samieegohar, Mohammadreza
Hi I need to make a rigid Gold nanoparticle to run a coarse grained simulation. my gold nanoparticle will penetrate in a lipid membrane I have built the initial structure by Material studio. This nanoparticle must be a internally freeze body while it can move as a rigid body My question is , how