Re: [gmx-users] maxh mdrun option does not work with REMD simulation

2016-04-05 Thread Mark Abraham
Hi, It should work, but apparently doesn't. Please open an issue at redmine.gromacs.org and include a tarball of your tpr files so we can see the problem happen and fix it. Meanwhile, I suggest the approach of using gmx grompp to construct a run that will complete in the maximum time you can

Re: [gmx-users] maxh mdrun option does not work with REMD simulation

2016-04-05 Thread Maud Jusot
Hello again I still don’t manage to restart correctly REMD simulation (see my previous message) but I can add some details. When it restarts, gromacs doesn’t create new checkpoint files (no matter –cpt option is), and doesn’t stop at maxh time. I tried with 3 different versions of gromacs

[gmx-users] maxh mdrun option does not work with REMD simulation

2016-03-29 Thread Maud Jusot
Dear Gromacs users, I tried to do a REMD simulation with gromacs 5.1 which is re-launched every hour (in a queuing system) with the -maxh option. The first time it was launched, it worked : the run stoped at the maxh time and it was re-launched with the checkpoint files and continued the