Re: [gmx-users] set computer time on REMD simulation

2017-12-18 Thread YanhuaOuyang
Sorry, it seems that I did not express my problem clearly. I add "-maxh 0.1", it should be terminated until 10 minutes maximumly. However, the MD did not stop after over one hour. At 2017-12-18 15:48:10, "Qinghua Liao" wrote: >Hello, > >If I understand correctly, it terminates at 0.99*t,

Re: [gmx-users] set computer time on REMD simulation

2017-12-17 Thread Qinghua Liao
Hello, If I understand correctly, it terminates at 0.99*t, t is the time you set in hour. In you case, you simulation should be terminated at 0.1*0.99 = 0.099 h, which is 5.94 minutes. PS: 0.1 h is not 10 minutes, but 6 minutes. All the best, Qinghua On 12/18/2017 08:05 AM, YanhuaOuyang wro

[gmx-users] set computer time on REMD simulation

2017-12-17 Thread YanhuaOuyang
Dear gromacs user, The computing workstation I used has a limited time: 6 hours, namely the REMD will be terminated after 6 hours. So I add option "-maxh 0.1" in the MD commands to test. The md commands are as below: mdrun_mpi -s remd_.tpr -multi 20 -replex 1000 -x remd_.xtc -cpo rem