Re: [gmx-users] trajectory tools don't work with large .xtc / .trr files

2015-02-11 Thread Mark Abraham
Hi, Rafael is probably on the right track. Using a file system with a limit of 2^32 bytes (=2GB) is just not going to work. One way that might happen is if you used a 32-bit Ubuntu, but that's just a guess. Bottom line - get a real 64-bit file system. Mark On Wed, Feb 11, 2015 at 2:26 PM, Rafael

Re: [gmx-users] trajectory tools don't work with large .xtc / .trr files

2015-02-11 Thread Rafael R. Pappalardo
Just one dumb idea. Your ubuntu is 32 or 64 bits? Rafael Rodríguez Pappalardo Depto. Química Física, Univ. de Sevilla > El 11/2/2015, a las 13:57, Wojciech Kopeć <9000...@gmail.com> escribió: > > Dear all, > > I've been using GROMACS successfully for quite some time on several > platforms, alth

[gmx-users] trajectory tools don't work with large .xtc / .trr files

2015-02-11 Thread Wojciech Kopeć
Dear all, I've been using GROMACS successfully for quite some time on several platforms, although after a recent upgrade my main linux workstation to Ubuntu 14.04 and new installation of latest GROMACS (5.0.4) I noticed very strange behaviour of several tools (mainly trjconv and gmxcheck). Basical